Mert Gur: search on Z-Library

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1

Pre-existing soft modes of motion uniquely defined by native contact topology facilitate ligand binding to proteins

Lidio Meireles, Mert Gur, Ahmet Bakan, Ivet Bahar

Journal:

Protein Science

Year:

2011

Language:

english

File:

PDF, 997 KB

english, 2011

2

Quasi-harmonic fluctuations of two bound peptides

Mert Gur, Burak Erman

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2012

Language:

english

File:

PDF, 289 KB

english, 2012

3

Deltoid (triangular)-shaped anterior cruciate ligament that caused notch impingement: a report of two cases

Osman U.ğur Çalpur, Mert Özcan, Hakan Gürbüz

Journal:

Arthroscopy: The Journal of Arthroscopic & Related Surgery

Year:

2004

Language:

english

File:

PDF, 166 KB

english, 2004

4

Statistical thermodynamics of residue fluctuations in native proteins

Yogurtcu, Osman N., Gur, Mert, Erman, Burak

Journal:

The Journal of Chemical Physics

Year:

2009

Language:

english

File:

PDF, 717 KB

english, 2009

5

Quasi-harmonic analysis of mode coupling in fluctuating native proteins

Gur, Mert, Erman, Burak

Journal:

Physical Biology

Year:

2010

Language:

english

File:

PDF, 1.47 MB

english, 2010

6

In England Now

Das, Avisek, Gur, Mert, Bahar, Ivet, Roux, Benoit

Journal:

Year:

1989

Language:

english

File:

PDF, 171 KB

english, 1989

7

A Simple Coarse-Grained Model to Map the Transition Pathway Between Two Stable Conformations using the Anisotropic Elastic Network Model

Das, Avisek, Gur, Mert, Bahar, Ivet, Roux, Benoit

Journal:

Biophysical Journal

Year:

2013

Language:

english

File:

PDF, 50 KB

english, 2013

8

Global Transitions of Proteins Explored by a Multiscale Hybrid Methodology: Application to Adenylate Kinase

Gur, Mert, Madura, Jeffry D., Bahar, Ivet

Journal:

Biophysical Journal

Year:

2013

Language:

english

File:

PDF, 2.40 MB

english, 2013

9

Global Transitions or Proteins Explored by a Multiscale Hybrid Methodology: Application to Dopamine Transporter

Gur, Mert, Madura, Jeffry, Bahar, Ivet

Journal:

Biophysical Journal

Year:

2013

Language:

english

File:

PDF, 50 KB

english, 2013

10

Transition Pathways of Proteins Explored by Combining Molecular Dynamics Simulations and Monte Carlo Sampling of Collective Modes

Gur, Mert, Madura, Jeffry, Bahar, Ivet

Journal:

Biophysical Journal

Year:

2012

Language:

english

File:

PDF, 40 KB

english, 2012

11

[IEEE 2010 5th International Symposium on Health Informatics and Bioinformatics - Ankara, Turkey (2010.04.20-2010.04.22)] 2010 5th International Symposium on Health Informatics and Bioinformatics - Coupling between energy and residue position fluctuations in native proteins

Gur, Mert, Erman, Burak

Year:

2010

Language:

english

File:

PDF, 456 KB

english, 2010

12

Microseconds Simulations Reveal a New Sodium-binding Site and the Mechanism of Sodium-coupled Substrate Uptake by LeuT

Zomot, Elia, Gur, Mert, Bahar, Ivet

Journal:

Journal of Biological Chemistry

Year:

2015

Language:

english

File:

PDF, 3.59 MB

english, 2015

13

Exploring the Conformational Transitions of Biomolecular Systems Using a Simple Two-State Anisotropic Network Model

Das, Avisek, Gur, Mert, Cheng, Mary Hongying, Jo, Sunhwan, Bahar, Ivet, Roux, Benoît, de Groot, Bert L.

Journal:

PLoS Computational Biology

Year:

2014

Language:

english

File:

PDF, 7.67 MB

english, 2014

14

Protein Folding Using Coarse-Grained Optimal Control and Molecular Dynamics

Arkun, Yaman, Gür, Mert

Journal:

IFAC Proceedings Volumes

Year:

2011

Language:

english

File:

PDF, 445 KB

english, 2011

15

Energy landscape of LeuT from molecular simulations

Gur, Mert, Zomot, Elia, Cheng, Mary Hongying, Bahar, Ivet

Journal:

The Journal of Chemical Physics

Year:

2015

Language:

english

File:

PDF, 6.36 MB

english, 2015

16

Effect of Dimerization on the Dynamics of Neurotransmitter:Sodium Symporters

Gur, Mert, Cheng, Mary Hongying, Zomot, Elia, Bahar, Ivet

Journal:

Journal of Physical Chemistry B

Year:

2017

Language:

english

File:

PDF, 3.72 MB

english, 2017

17

Importance of Dimerization in Facilitating the Functional Dynamics of Neurotransmitter: Sodium Symporters

Gur, Mert, Cheng, Mary H., Zomot, Elia, Bahar, Ivet

Journal:

Biophysical Journal

Year:

2017

Language:

english

File:

PDF, 45 KB

english, 2017

18

Molecular dynamics simulations of site point mutations in the TPR domain of cyclophilin 40 identify conformational states with distinct dynamic and enzymatic properties

Gur, Mert, Blackburn, Elizabeth A., Ning, Jia, Narayan, Vikram, Ball, Kathryn L., Walkinshaw, Malcolm D., Erman, Burak

Journal:

The Journal of Chemical Physics

Year:

2018

Language:

english

File:

PDF, 4.83 MB

english, 2018

19

Combining Optimal Control Theory and Molecular Dynamics for Protein Folding

Arkun, Yaman, Gur, Mert, Pastore, Annalisa

Journal:

Year:

2012

Language:

english

File:

PDF, 416 KB

english, 2012

20

Achieving consensus on the undergraduate curriculum of public health nursing in Turkey

Kadioglu, Hasibe, Albayrak, Sevil, Ergun, Ayse, Yurt, Seher, Gur, Kamer, Mert, Kader, Erol, Saime, Esin, Melek Nihal

Journal:

Public Health Nursing

Year:

2018

Language:

english

File:

PDF, 620 KB

english, 2018

21

Directionality of dynein is controlled by the angle and length of its stalk

Can, Sinan, Lacey, Samuel, Gur, Mert, Carter, Andrew P., Yildiz, Ahmet

Journal:

Year:

2019

File:

PDF, 25.92 MB

2019

22

A novel small-molecule antagonizes PRMT5-mediated KLF4 methylation for targeted therapy

Zhou, Zhuan, Feng, Zhiwei, Hu, Dong, Yang, Peng, Gur, Mert, Bahar, Ivet, Cristofanilli, Massimo, Gradishar, William J., Xie, Xiang-qun, Wan, Yong

Journal:

Year:

2019

Language:

english

File:

PDF, 5.48 MB

english, 2019

23

Dynein's Directionality is Controlled by the Angle and Length of its Stalk

Can, Sinan, Lacey, Samuel, Gur, Mert, Carter, Andrew, Yildiz, Ahmet

Journal:

Biophysical Journal

Year:

2019

Language:

english

File:

PDF, 41 KB

english, 2019

24

Molecular dynamics simulations provide molecular insights into the role of HLAâB51 in BehÃ§et's disease pathogenesis

Gur, Mert, Golcuk, Mert, Gul, Ahmet, Erman, Burak

Journal:

Chemical Biology & Drug Design

Year:

2020

File:

PDF, 2.04 MB

2020

25

Conformational transition of SARS-CoV-2 spike glycoprotein between its closed and open states

Gur, Mert, Taka, Elhan, Yilmaz, Sema Zeynep, Kilinc, Ceren, Aktas, Umut, Golcuk, Mert

Journal:

The Journal of Chemical Physics

Year:

2020

File:

PDF, 10.62 MB

2020